Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN18P56856 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN18P56856 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN18P56856 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN18P56856 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN18P56856 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN18P56856 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLDN18P56856 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN18P56856 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN18P56856 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLDN18P56856 C17orf82-201ENST00000623772 1530 ntBASIC20.34■□□□□ 0.85
CLDN18P56856 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN18P56856 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN18P56856 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN18P56856 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN18P56856 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN18P56856 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLDN18P56856 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLDN18P56856 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN18P56856 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN18P56856 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN18P56856 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN18P56856 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
CLDN18P56856 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.33■□□□□ 0.84
CLDN18P56856 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN18P56856 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN18P56856 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN18P56856 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLDN18P56856 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDN18P56856 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN18P56856 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN18P56856 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN18P56856 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN18P56856 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN18P56856 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN18P56856 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN18P56856 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN18P56856 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN18P56856 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN18P56856 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN18P56856 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN18P56856 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN18P56856 AC004812.2-201ENST00000611079 2094 ntBASIC20.31■□□□□ 0.84
CLDN18P56856 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN18P56856 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLDN18P56856 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLDN18P56856 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN18P56856 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN18P56856 MIR638-201ENST00000385237 100 ntBASIC20.3■□□□□ 0.84
CLDN18P56856 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN18P56856 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN18P56856 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN18P56856 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN18P56856 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN18P56856 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN18P56856 UNC93B3-201ENST00000308076 687 ntBASIC20.29■□□□□ 0.84
CLDN18P56856 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 AC099791.2-201ENST00000605725 427 ntBASIC20.28■□□□□ 0.84
CLDN18P56856 AC092171.4-201ENST00000609130 632 ntBASIC20.28■□□□□ 0.84
CLDN18P56856 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.28■□□□□ 0.84
CLDN18P56856 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN18P56856 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
CLDN18P56856 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
CLDN18P56856 DUX4L19-201ENST00000557448 1267 ntBASIC20.27■□□□□ 0.84
CLDN18P56856 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN18P56856 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN18P56856 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN18P56856 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN18P56856 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CLDN18P56856 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN18P56856 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN18P56856 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLDN18P56856 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN18P56856 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN18P56856 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN18P56856 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN18P56856 AC241377.3-202ENST00000626088 1088 ntBASIC20.26■□□□□ 0.83
CLDN18P56856 AC241585.3-202ENST00000628937 1088 ntBASIC20.26■□□□□ 0.83
CLDN18P56856 AC245100.8-202ENST00000629247 1058 ntBASIC20.26■□□□□ 0.83
CLDN18P56856 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN18P56856 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms