Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMSP52788 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMSP52788 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.14■□□□□ 0.97
SMSP52788 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.14■□□□□ 0.97
SMSP52788 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMSP52788 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMSP52788 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.13■□□□□ 0.97
SMSP52788 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMSP52788 AL356740.2-201ENST00000601559 647 ntBASIC21.13■□□□□ 0.97
SMSP52788 MIR6724-1-201ENST00000616420 92 ntBASIC21.13■□□□□ 0.97
SMSP52788 MIR6724-2-201ENST00000616483 92 ntBASIC21.13■□□□□ 0.97
SMSP52788 MIR6724-4-201ENST00000617390 92 ntBASIC21.13■□□□□ 0.97
SMSP52788 MIR6724-3-201ENST00000622482 92 ntBASIC21.13■□□□□ 0.97
SMSP52788 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMSP52788 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMSP52788 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMSP52788 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMSP52788 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMSP52788 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SMSP52788 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.12■□□□□ 0.97
SMSP52788 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.12■□□□□ 0.97
SMSP52788 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMSP52788 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMSP52788 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMSP52788 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMSP52788 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.12■□□□□ 0.97
SMSP52788 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.11■□□□□ 0.97
SMSP52788 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SMSP52788 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMSP52788 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.11■□□□□ 0.97
SMSP52788 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SMSP52788 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SMSP52788 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMSP52788 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.1■□□□□ 0.97
SMSP52788 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMSP52788 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.1■□□□□ 0.97
SMSP52788 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMSP52788 AL117332.1-201ENST00000622628 974 ntBASIC21.1■□□□□ 0.97
SMSP52788 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SMSP52788 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SMSP52788 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SMSP52788 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SMSP52788 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
SMSP52788 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
SMSP52788 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SMSP52788 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.09■□□□□ 0.97
SMSP52788 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.09■□□□□ 0.97
SMSP52788 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 MIR3621-201ENST00000580529 85 ntBASIC21.09■□□□□ 0.97
SMSP52788 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 AC011551.1-201ENST00000614101 683 ntBASIC21.09■□□□□ 0.97
SMSP52788 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SMSP52788 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.08■□□□□ 0.97
SMSP52788 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SMSP52788 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SMSP52788 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.08■□□□□ 0.97
SMSP52788 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.96
SMSP52788 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
SMSP52788 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SMSP52788 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.07■□□□□ 0.96
SMSP52788 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SMSP52788 FOXO3B-201ENST00000395675 1928 ntBASIC21.07■□□□□ 0.96
SMSP52788 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMSP52788 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMSP52788 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMSP52788 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMSP52788 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.06■□□□□ 0.96
SMSP52788 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.06■□□□□ 0.96
SMSP52788 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMSP52788 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMSP52788 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.06■□□□□ 0.96
SMSP52788 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMSP52788 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.06■□□□□ 0.96
SMSP52788 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
SMSP52788 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.05■□□□□ 0.96
SMSP52788 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMSP52788 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SMSP52788 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.05■□□□□ 0.96
SMSP52788 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms