Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR4P51571 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SSR4P51571 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR4P51571 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR4P51571 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR4P51571 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR4P51571 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR4P51571 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SSR4P51571 LINC00543-201ENST00000567234 1845 ntBASIC20.85■□□□□ 0.93
SSR4P51571 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SSR4P51571 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.85■□□□□ 0.93
SSR4P51571 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.85■□□□□ 0.93
SSR4P51571 DUX4L19-201ENST00000557448 1267 ntBASIC20.85■□□□□ 0.93
SSR4P51571 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SSR4P51571 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 AL139125.2-201ENST00000623134 1869 ntBASIC20.85■□□□□ 0.93
SSR4P51571 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.85■□□□□ 0.93
SSR4P51571 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR4P51571 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR4P51571 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR4P51571 C17orf82-201ENST00000623772 1530 ntBASIC20.84■□□□□ 0.93
SSR4P51571 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR4P51571 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SSR4P51571 AC019069.1-201ENST00000610008 1333 ntBASIC20.84■□□□□ 0.93
SSR4P51571 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.84■□□□□ 0.93
SSR4P51571 UNC93B3-201ENST00000308076 687 ntBASIC20.84■□□□□ 0.93
SSR4P51571 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR4P51571 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR4P51571 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.84■□□□□ 0.93
SSR4P51571 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR4P51571 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR4P51571 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR4P51571 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR4P51571 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSR4P51571 MIR638-201ENST00000385237 100 ntBASIC20.83■□□□□ 0.93
SSR4P51571 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.83■□□□□ 0.93
SSR4P51571 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR4P51571 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSR4P51571 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.83■□□□□ 0.93
SSR4P51571 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR4P51571 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.83■□□□□ 0.92
SSR4P51571 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.82■□□□□ 0.92
SSR4P51571 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SSR4P51571 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.82■□□□□ 0.92
SSR4P51571 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SSR4P51571 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 AC099791.2-201ENST00000605725 427 ntBASIC20.82■□□□□ 0.92
SSR4P51571 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR4P51571 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SSR4P51571 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SSR4P51571 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.82■□□□□ 0.92
SSR4P51571 SYT6-210ENST00000641643 1587 ntBASIC20.81■□□□□ 0.92
SSR4P51571 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SSR4P51571 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSR4P51571 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.81■□□□□ 0.92
SSR4P51571 PBX2P1-201ENST00000493219 1291 ntBASIC20.81■□□□□ 0.92
SSR4P51571 AL136162.1-201ENST00000607711 1078 ntBASIC20.81■□□□□ 0.92
SSR4P51571 AC241377.3-202ENST00000626088 1088 ntBASIC20.81■□□□□ 0.92
SSR4P51571 AC241585.3-202ENST00000628937 1088 ntBASIC20.81■□□□□ 0.92
SSR4P51571 AC245100.8-202ENST00000629247 1058 ntBASIC20.81■□□□□ 0.92
SSR4P51571 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSR4P51571 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSR4P51571 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.81■□□□□ 0.92
SSR4P51571 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SSR4P51571 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSR4P51571 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SSR4P51571 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.8■□□□□ 0.92
SSR4P51571 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.8■□□□□ 0.92
SSR4P51571 AC106739.1-201ENST00000617035 715 ntBASIC20.8■□□□□ 0.92
SSR4P51571 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SSR4P51571 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR4P51571 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSR4P51571 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SSR4P51571 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR4P51571 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR4P51571 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR4P51571 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
SSR4P51571 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR4P51571 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.79■□□□□ 0.92
SSR4P51571 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSR4P51571 AC135279.3-201ENST00000610945 1311 ntBASIC20.78■□□□□ 0.92
SSR4P51571 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms