Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
TUBP50607 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.87■■□□□ 1.41
TUBP50607 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TUBP50607 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.87■■□□□ 1.41
TUBP50607 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TUBP50607 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.86■■□□□ 1.41
TUBP50607 AL139125.2-201ENST00000623134 1869 ntBASIC23.86■■□□□ 1.41
TUBP50607 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TUBP50607 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
TUBP50607 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TUBP50607 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TUBP50607 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TUBP50607 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.86■■□□□ 1.41
TUBP50607 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.85■■□□□ 1.41
TUBP50607 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TUBP50607 AL139246.5-201ENST00000606645 996 ntBASIC23.85■■□□□ 1.41
TUBP50607 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TUBP50607 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TUBP50607 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TUBP50607 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.84■■□□□ 1.41
TUBP50607 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.84■■□□□ 1.41
TUBP50607 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TUBP50607 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TUBP50607 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TUBP50607 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.83■■□□□ 1.41
TUBP50607 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TUBP50607 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.83■■□□□ 1.41
TUBP50607 SRD5A1P1-201ENST00000442297 786 ntBASIC23.83■■□□□ 1.41
TUBP50607 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TUBP50607 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.83■■□□□ 1.41
TUBP50607 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TUBP50607 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
TUBP50607 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
TUBP50607 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.83■■□□□ 1.4
TUBP50607 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBP50607 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TUBP50607 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBP50607 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.82■■□□□ 1.4
TUBP50607 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
TUBP50607 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBP50607 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TUBP50607 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBP50607 LINC01124-201ENST00000409786 2117 ntBASIC23.81■■□□□ 1.4
TUBP50607 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TUBP50607 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.81■■□□□ 1.4
TUBP50607 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.81■■□□□ 1.4
TUBP50607 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TUBP50607 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TUBP50607 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.81■■□□□ 1.4
TUBP50607 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.81■■□□□ 1.4
TUBP50607 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TUBP50607 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TUBP50607 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TUBP50607 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TUBP50607 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.8■■□□□ 1.4
TUBP50607 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TUBP50607 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.8■■□□□ 1.4
TUBP50607 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TUBP50607 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.8■■□□□ 1.4
TUBP50607 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.79■■□□□ 1.4
TUBP50607 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.79■■□□□ 1.4
TUBP50607 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TUBP50607 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TUBP50607 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.79■■□□□ 1.4
TUBP50607 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TUBP50607 AC110285.6-201ENST00000617652 491 ntBASIC23.79■■□□□ 1.4
TUBP50607 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TUBP50607 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TUBP50607 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TUBP50607 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TUBP50607 AC019069.1-201ENST00000610008 1333 ntBASIC23.79■■□□□ 1.4
TUBP50607 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.78■■□□□ 1.4
TUBP50607 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 MIR638-201ENST00000385237 100 ntBASIC23.78■■□□□ 1.4
TUBP50607 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 AC096631.2-201ENST00000436136 790 ntBASIC23.78■■□□□ 1.4
TUBP50607 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.78■■□□□ 1.4
TUBP50607 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TUBP50607 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TUBP50607 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TUBP50607 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TUBP50607 ALDH1A3-203ENST00000557963 1670 ntBASIC23.77■■□□□ 1.4
TUBP50607 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.77■■□□□ 1.4
TUBP50607 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TUBP50607 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TUBP50607 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TUBP50607 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.77■■□□□ 1.4
TUBP50607 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms