Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LHX2P50458 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LHX2P50458 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LHX2P50458 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LHX2P50458 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.37■□□□□ 0.85
LHX2P50458 AC110285.6-201ENST00000617652 491 ntBASIC20.37■□□□□ 0.85
LHX2P50458 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LHX2P50458 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LHX2P50458 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LHX2P50458 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LHX2P50458 C17orf82-201ENST00000623772 1530 ntBASIC20.37■□□□□ 0.85
LHX2P50458 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LHX2P50458 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.36■□□□□ 0.85
LHX2P50458 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LHX2P50458 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LHX2P50458 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LHX2P50458 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LHX2P50458 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.35■□□□□ 0.85
LHX2P50458 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
LHX2P50458 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.35■□□□□ 0.85
LHX2P50458 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LHX2P50458 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.35■□□□□ 0.85
LHX2P50458 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LHX2P50458 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.35■□□□□ 0.85
LHX2P50458 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX2P50458 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LHX2P50458 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX2P50458 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX2P50458 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.34■□□□□ 0.85
LHX2P50458 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.34■□□□□ 0.85
LHX2P50458 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LHX2P50458 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LHX2P50458 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LHX2P50458 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LHX2P50458 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LHX2P50458 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LHX2P50458 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.33■□□□□ 0.85
LHX2P50458 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.33■□□□□ 0.85
LHX2P50458 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.33■□□□□ 0.85
LHX2P50458 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LHX2P50458 AC004812.2-201ENST00000611079 2094 ntBASIC20.33■□□□□ 0.84
LHX2P50458 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.33■□□□□ 0.84
LHX2P50458 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX2P50458 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LHX2P50458 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX2P50458 UNC93B3-201ENST00000308076 687 ntBASIC20.32■□□□□ 0.84
LHX2P50458 MIR638-201ENST00000385237 100 ntBASIC20.32■□□□□ 0.84
LHX2P50458 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LHX2P50458 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.32■□□□□ 0.84
LHX2P50458 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LHX2P50458 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
LHX2P50458 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX2P50458 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX2P50458 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.31■□□□□ 0.84
LHX2P50458 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX2P50458 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LHX2P50458 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
LHX2P50458 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.3■□□□□ 0.84
LHX2P50458 AC099791.2-201ENST00000605725 427 ntBASIC20.3■□□□□ 0.84
LHX2P50458 AC092171.4-201ENST00000609130 632 ntBASIC20.3■□□□□ 0.84
LHX2P50458 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.3■□□□□ 0.84
LHX2P50458 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LHX2P50458 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
LHX2P50458 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LHX2P50458 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 DUX4L19-201ENST00000557448 1267 ntBASIC20.29■□□□□ 0.84
LHX2P50458 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.29■□□□□ 0.84
LHX2P50458 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LHX2P50458 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.29■□□□□ 0.84
LHX2P50458 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LHX2P50458 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX2P50458 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LHX2P50458 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX2P50458 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.28■□□□□ 0.84
LHX2P50458 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX2P50458 AC106739.1-201ENST00000617035 715 ntBASIC20.28■□□□□ 0.84
LHX2P50458 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
LHX2P50458 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
LHX2P50458 AC245100.8-202ENST00000629247 1058 ntBASIC20.28■□□□□ 0.84
LHX2P50458 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms