Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 MIR4508-201ENST00000584178 70 ntBASIC20■□□□□ 0.79
SRP9P49458 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20■□□□□ 0.79
SRP9P49458 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20■□□□□ 0.79
SRP9P49458 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20■□□□□ 0.79
SRP9P49458 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.99■□□□□ 0.79
SRP9P49458 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.99■□□□□ 0.79
SRP9P49458 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.99■□□□□ 0.79
SRP9P49458 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SRP9P49458 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 KRT8P33-201ENST00000508125 1423 ntBASIC19.99■□□□□ 0.79
SRP9P49458 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
SRP9P49458 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SRP9P49458 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP9P49458 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP9P49458 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.98■□□□□ 0.79
SRP9P49458 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.98■□□□□ 0.79
SRP9P49458 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SRP9P49458 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.97■□□□□ 0.79
SRP9P49458 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP9P49458 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.97■□□□□ 0.79
SRP9P49458 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRP9P49458 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SRP9P49458 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP9P49458 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.97■□□□□ 0.79
SRP9P49458 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.97■□□□□ 0.79
SRP9P49458 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SRP9P49458 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.97■□□□□ 0.79
SRP9P49458 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SRP9P49458 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.96■□□□□ 0.79
SRP9P49458 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.96■□□□□ 0.79
SRP9P49458 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SRP9P49458 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.96■□□□□ 0.79
SRP9P49458 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SRP9P49458 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.95■□□□□ 0.79
SRP9P49458 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SRP9P49458 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.95■□□□□ 0.78
SRP9P49458 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SRP9P49458 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SRP9P49458 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
SRP9P49458 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SRP9P49458 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SRP9P49458 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.94■□□□□ 0.78
SRP9P49458 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SRP9P49458 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.94■□□□□ 0.78
SRP9P49458 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SRP9P49458 AL024507.2-201ENST00000606070 2574 ntBASIC19.93■□□□□ 0.78
SRP9P49458 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SRP9P49458 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.93■□□□□ 0.78
SRP9P49458 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
SRP9P49458 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
SRP9P49458 AC103834.1-201ENST00000520383 144 ntBASIC19.93■□□□□ 0.78
SRP9P49458 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.93■□□□□ 0.78
SRP9P49458 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SRP9P49458 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
SRP9P49458 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SRP9P49458 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms