Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RFC5P40937 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.14■■□□□ 1.62
RFC5P40937 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.14■■□□□ 1.62
RFC5P40937 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.14■■□□□ 1.61
RFC5P40937 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.14■■□□□ 1.61
RFC5P40937 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.14■■□□□ 1.61
RFC5P40937 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.14■■□□□ 1.61
RFC5P40937 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
RFC5P40937 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFC5P40937 C17orf82-201ENST00000623772 1530 ntBASIC25.13■■□□□ 1.61
RFC5P40937 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
RFC5P40937 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RFC5P40937 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFC5P40937 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RFC5P40937 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.13■■□□□ 1.61
RFC5P40937 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFC5P40937 AL139246.5-201ENST00000606645 996 ntBASIC25.13■■□□□ 1.61
RFC5P40937 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
RFC5P40937 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
RFC5P40937 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
RFC5P40937 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.12■■□□□ 1.61
RFC5P40937 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFC5P40937 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFC5P40937 AC096631.2-201ENST00000436136 790 ntBASIC25.12■■□□□ 1.61
RFC5P40937 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.12■■□□□ 1.61
RFC5P40937 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.12■■□□□ 1.61
RFC5P40937 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RFC5P40937 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RFC5P40937 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RFC5P40937 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RFC5P40937 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
RFC5P40937 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.11■■□□□ 1.61
RFC5P40937 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.11■■□□□ 1.61
RFC5P40937 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.11■■□□□ 1.61
RFC5P40937 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
RFC5P40937 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RFC5P40937 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RFC5P40937 AC092171.4-201ENST00000609130 632 ntBASIC25.1■■□□□ 1.61
RFC5P40937 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
RFC5P40937 AC110285.6-201ENST00000617652 491 ntBASIC25.1■■□□□ 1.61
RFC5P40937 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RFC5P40937 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RFC5P40937 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.09■■□□□ 1.61
RFC5P40937 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RFC5P40937 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFC5P40937 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
RFC5P40937 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RFC5P40937 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.08■■□□□ 1.61
RFC5P40937 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.08■■□□□ 1.61
RFC5P40937 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
RFC5P40937 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.08■■□□□ 1.6
RFC5P40937 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFC5P40937 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RFC5P40937 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC5P40937 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RFC5P40937 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RFC5P40937 DUX4L19-201ENST00000557448 1267 ntBASIC25.07■■□□□ 1.6
RFC5P40937 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.07■■□□□ 1.6
RFC5P40937 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
RFC5P40937 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.06■■□□□ 1.6
RFC5P40937 AC241377.3-202ENST00000626088 1088 ntBASIC25.06■■□□□ 1.6
RFC5P40937 AC241585.3-202ENST00000628937 1088 ntBASIC25.06■■□□□ 1.6
RFC5P40937 AC245100.8-202ENST00000629247 1058 ntBASIC25.06■■□□□ 1.6
RFC5P40937 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RFC5P40937 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.05■■□□□ 1.6
RFC5P40937 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.05■■□□□ 1.6
RFC5P40937 UNC93B3-201ENST00000308076 687 ntBASIC25.05■■□□□ 1.6
RFC5P40937 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RFC5P40937 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.04■■□□□ 1.6
RFC5P40937 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.04■■□□□ 1.6
RFC5P40937 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.04■■□□□ 1.6
RFC5P40937 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.04■■□□□ 1.6
RFC5P40937 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.04■■□□□ 1.6
RFC5P40937 AC099791.2-201ENST00000605725 427 ntBASIC25.04■■□□□ 1.6
RFC5P40937 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.04■■□□□ 1.6
RFC5P40937 AC004812.2-201ENST00000611079 2094 ntBASIC25.04■■□□□ 1.6
RFC5P40937 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFC5P40937 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFC5P40937 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms