Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SAA4P35542 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SAA4P35542 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.38■□□□□ 0.53
SAA4P35542 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
SAA4P35542 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.37■□□□□ 0.53
SAA4P35542 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.37■□□□□ 0.53
SAA4P35542 AC110285.6-201ENST00000617652 491 ntBASIC18.37■□□□□ 0.53
SAA4P35542 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.37■□□□□ 0.53
SAA4P35542 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
SAA4P35542 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.37■□□□□ 0.53
SAA4P35542 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SAA4P35542 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SAA4P35542 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA4P35542 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SAA4P35542 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SAA4P35542 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SAA4P35542 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.35■□□□□ 0.53
SAA4P35542 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SAA4P35542 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.35■□□□□ 0.53
SAA4P35542 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SAA4P35542 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SAA4P35542 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SAA4P35542 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.34■□□□□ 0.53
SAA4P35542 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SAA4P35542 C17orf82-201ENST00000623772 1530 ntBASIC18.34■□□□□ 0.53
SAA4P35542 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAA4P35542 AC092171.4-201ENST00000609130 632 ntBASIC18.34■□□□□ 0.53
SAA4P35542 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SAA4P35542 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.34■□□□□ 0.53
SAA4P35542 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SAA4P35542 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SAA4P35542 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.34■□□□□ 0.53
SAA4P35542 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SAA4P35542 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SAA4P35542 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SAA4P35542 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.33■□□□□ 0.52
SAA4P35542 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA4P35542 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA4P35542 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SAA4P35542 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.32■□□□□ 0.52
SAA4P35542 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SAA4P35542 AC019069.1-201ENST00000610008 1333 ntBASIC18.32■□□□□ 0.52
SAA4P35542 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SAA4P35542 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SAA4P35542 UNC93B3-201ENST00000308076 687 ntBASIC18.32■□□□□ 0.52
SAA4P35542 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SAA4P35542 MIR638-201ENST00000385237 100 ntBASIC18.32■□□□□ 0.52
SAA4P35542 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.32■□□□□ 0.52
SAA4P35542 AC099791.2-201ENST00000605725 427 ntBASIC18.32■□□□□ 0.52
SAA4P35542 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SAA4P35542 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.32■□□□□ 0.52
SAA4P35542 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SAA4P35542 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SAA4P35542 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SAA4P35542 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.31■□□□□ 0.52
SAA4P35542 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 DUX4L19-201ENST00000557448 1267 ntBASIC18.31■□□□□ 0.52
SAA4P35542 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.31■□□□□ 0.52
SAA4P35542 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.31■□□□□ 0.52
SAA4P35542 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.31■□□□□ 0.52
SAA4P35542 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SAA4P35542 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 PBX2P1-201ENST00000493219 1291 ntBASIC18.3■□□□□ 0.52
SAA4P35542 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.3■□□□□ 0.52
SAA4P35542 AL136162.1-201ENST00000607711 1078 ntBASIC18.3■□□□□ 0.52
SAA4P35542 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.3■□□□□ 0.52
SAA4P35542 AC241377.3-202ENST00000626088 1088 ntBASIC18.3■□□□□ 0.52
SAA4P35542 AC241585.3-202ENST00000628937 1088 ntBASIC18.3■□□□□ 0.52
SAA4P35542 AC245100.8-202ENST00000629247 1058 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms