Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
MSR1P21757 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MSR1P21757 KRT125P-201ENST00000546827 989 ntBASIC19.98■□□□□ 0.79
MSR1P21757 Z92544.1-202ENST00000571933 1220 ntBASIC19.98■□□□□ 0.79
MSR1P21757 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MSR1P21757 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.98■□□□□ 0.79
MSR1P21757 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.98■□□□□ 0.79
MSR1P21757 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
MSR1P21757 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
MSR1P21757 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSR1P21757 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MSR1P21757 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSR1P21757 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.97■□□□□ 0.79
MSR1P21757 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
MSR1P21757 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.96■□□□□ 0.79
MSR1P21757 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.96■□□□□ 0.79
MSR1P21757 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.96■□□□□ 0.79
MSR1P21757 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.96■□□□□ 0.79
MSR1P21757 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 ANOS2P-203ENST00000472227 1816 ntBASIC19.96■□□□□ 0.79
MSR1P21757 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.96■□□□□ 0.79
MSR1P21757 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MSR1P21757 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.95■□□□□ 0.79
MSR1P21757 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.95■□□□□ 0.79
MSR1P21757 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
MSR1P21757 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MSR1P21757 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
MSR1P21757 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MSR1P21757 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.95■□□□□ 0.78
MSR1P21757 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MSR1P21757 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MSR1P21757 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.95■□□□□ 0.78
MSR1P21757 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSR1P21757 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MSR1P21757 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 AC009299.2-201ENST00000482477 511 ntBASIC19.94■□□□□ 0.78
MSR1P21757 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.94■□□□□ 0.78
MSR1P21757 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.94■□□□□ 0.78
MSR1P21757 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSR1P21757 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
MSR1P21757 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.93■□□□□ 0.78
MSR1P21757 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSR1P21757 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.93■□□□□ 0.78
MSR1P21757 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.93■□□□□ 0.78
MSR1P21757 AL451085.2-201ENST00000605085 799 ntBASIC19.93■□□□□ 0.78
MSR1P21757 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MSR1P21757 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSR1P21757 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.93■□□□□ 0.78
MSR1P21757 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSR1P21757 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MSR1P21757 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSR1P21757 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.93■□□□□ 0.78
MSR1P21757 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.93■□□□□ 0.78
MSR1P21757 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MSR1P21757 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSR1P21757 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSR1P21757 AC092028.1-203ENST00000608262 953 ntBASIC19.92■□□□□ 0.78
MSR1P21757 MIR6722-201ENST00000617286 78 ntBASIC19.92■□□□□ 0.78
MSR1P21757 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.92■□□□□ 0.78
MSR1P21757 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.92■□□□□ 0.78
MSR1P21757 AC092068.2-201ENST00000590491 1708 ntBASIC19.92■□□□□ 0.78
MSR1P21757 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.92■□□□□ 0.78
MSR1P21757 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MSR1P21757 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms