Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ATF1P18846 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF1P18846 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ATF1P18846 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF1P18846 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF1P18846 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
ATF1P18846 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATF1P18846 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.89■□□□□ 0.77
ATF1P18846 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATF1P18846 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
ATF1P18846 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF1P18846 DUX4L9-201ENST00000449051 1259 ntBASIC19.88■□□□□ 0.77
ATF1P18846 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
ATF1P18846 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF1P18846 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF1P18846 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF1P18846 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ATF1P18846 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
ATF1P18846 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF1P18846 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 RARRES2P2-201ENST00000394842 485 ntBASIC19.87■□□□□ 0.77
ATF1P18846 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF1P18846 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.87■□□□□ 0.77
ATF1P18846 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF1P18846 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ATF1P18846 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.86■□□□□ 0.77
ATF1P18846 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.86■□□□□ 0.77
ATF1P18846 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.86■□□□□ 0.77
ATF1P18846 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.86■□□□□ 0.77
ATF1P18846 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF1P18846 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ATF1P18846 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF1P18846 AC127496.7-201ENST00000625110 1798 ntBASIC19.85■□□□□ 0.77
ATF1P18846 ECEL1P1-201ENST00000373592 1742 ntBASIC19.85■□□□□ 0.77
ATF1P18846 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF1P18846 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF1P18846 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
ATF1P18846 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.85■□□□□ 0.77
ATF1P18846 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ATF1P18846 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF1P18846 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
ATF1P18846 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ATF1P18846 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF1P18846 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
ATF1P18846 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATF1P18846 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ATF1P18846 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ATF1P18846 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATF1P18846 U85056.1-201ENST00000616429 682 ntBASIC19.83■□□□□ 0.77
ATF1P18846 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATF1P18846 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATF1P18846 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATF1P18846 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATF1P18846 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.83■□□□□ 0.76
ATF1P18846 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.83■□□□□ 0.76
ATF1P18846 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.83■□□□□ 0.76
ATF1P18846 AC137767.1-201ENST00000602918 1920 ntBASIC19.82■□□□□ 0.76
ATF1P18846 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ATF1P18846 HSD17B1P1-201ENST00000590052 955 ntBASIC19.82■□□□□ 0.76
ATF1P18846 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATF1P18846 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.82■□□□□ 0.76
ATF1P18846 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATF1P18846 AC129492.7-201ENST00000622992 756 ntBASIC19.81■□□□□ 0.76
ATF1P18846 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms