Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1DP16402 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H1DP16402 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H1DP16402 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HIST1H1DP16402 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1DP16402 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 SPCS2P3-201ENST00000500401 656 ntBASIC19.21■□□□□ 0.67
HIST1H1DP16402 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.21■□□□□ 0.67
HIST1H1DP16402 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1DP16402 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 ECEL1P1-201ENST00000373592 1742 ntBASIC19.2■□□□□ 0.66
HIST1H1DP16402 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 MIR4449-201ENST00000578365 66 ntBASIC19.2■□□□□ 0.66
HIST1H1DP16402 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
HIST1H1DP16402 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HIST1H1DP16402 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1DP16402 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H1DP16402 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
HIST1H1DP16402 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 AC127496.7-201ENST00000625110 1798 ntBASIC19.19■□□□□ 0.66
HIST1H1DP16402 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 AL592293.1-201ENST00000502889 1188 ntBASIC19.19■□□□□ 0.66
HIST1H1DP16402 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H1DP16402 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1DP16402 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HIST1H1DP16402 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.18■□□□□ 0.66
HIST1H1DP16402 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.18■□□□□ 0.66
HIST1H1DP16402 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1DP16402 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 MIR6765-201ENST00000614092 87 ntBASIC19.17■□□□□ 0.66
HIST1H1DP16402 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HIST1H1DP16402 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST1H1DP16402 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 AC131274.2-201ENST00000580697 1507 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms