Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.7■□□□□ 0.58
TGFAP01135 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TGFAP01135 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TGFAP01135 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TGFAP01135 DUSP8P4-201ENST00000399538 1761 ntBASIC18.7■□□□□ 0.58
TGFAP01135 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TGFAP01135 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.69■□□□□ 0.58
TGFAP01135 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.69■□□□□ 0.58
TGFAP01135 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.69■□□□□ 0.58
TGFAP01135 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TGFAP01135 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TGFAP01135 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TGFAP01135 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TGFAP01135 AC126544.1-201ENST00000580842 1059 ntBASIC18.68■□□□□ 0.58
TGFAP01135 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.68■□□□□ 0.58
TGFAP01135 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TGFAP01135 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.67■□□□□ 0.58
TGFAP01135 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TGFAP01135 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TGFAP01135 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TGFAP01135 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TGFAP01135 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.67■□□□□ 0.58
TGFAP01135 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.67■□□□□ 0.58
TGFAP01135 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.67■□□□□ 0.58
TGFAP01135 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.67■□□□□ 0.58
TGFAP01135 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TGFAP01135 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.67■□□□□ 0.58
TGFAP01135 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.67■□□□□ 0.58
TGFAP01135 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TGFAP01135 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.66■□□□□ 0.58
TGFAP01135 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.66■□□□□ 0.58
TGFAP01135 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 pRNA.6-201ENST00000610482 90 ntBASIC18.66■□□□□ 0.58
TGFAP01135 pRNA.5-201ENST00000612139 90 ntBASIC18.66■□□□□ 0.58
TGFAP01135 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.66■□□□□ 0.58
TGFAP01135 pRNA.11-201ENST00000618423 90 ntBASIC18.66■□□□□ 0.58
TGFAP01135 pRNA.13-201ENST00000619112 90 ntBASIC18.66■□□□□ 0.58
TGFAP01135 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TGFAP01135 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TGFAP01135 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TGFAP01135 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TGFAP01135 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.65■□□□□ 0.58
TGFAP01135 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.65■□□□□ 0.58
TGFAP01135 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TGFAP01135 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TGFAP01135 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.65■□□□□ 0.58
TGFAP01135 AL161729.1-201ENST00000604104 1402 ntBASIC18.65■□□□□ 0.58
TGFAP01135 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TGFAP01135 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
TGFAP01135 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TGFAP01135 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.64■□□□□ 0.58
TGFAP01135 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.64■□□□□ 0.57
TGFAP01135 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.64■□□□□ 0.57
TGFAP01135 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TGFAP01135 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TGFAP01135 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TGFAP01135 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TGFAP01135 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.63■□□□□ 0.57
TGFAP01135 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
TGFAP01135 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.63■□□□□ 0.57
TGFAP01135 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TGFAP01135 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.63■□□□□ 0.57
TGFAP01135 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TGFAP01135 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TGFAP01135 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TGFAP01135 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
TGFAP01135 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TGFAP01135 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TGFAP01135 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.62■□□□□ 0.57
TGFAP01135 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TGFAP01135 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TGFAP01135 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms