Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.96■■□□□ 1.11
PEX1O43933 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PEX1O43933 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PEX1O43933 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PEX1O43933 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
PEX1O43933 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PEX1O43933 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.95■■□□□ 1.1
PEX1O43933 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.95■■□□□ 1.1
PEX1O43933 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PEX1O43933 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX1O43933 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PEX1O43933 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PEX1O43933 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.94■■□□□ 1.1
PEX1O43933 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PEX1O43933 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.94■■□□□ 1.1
PEX1O43933 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PEX1O43933 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX1O43933 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
PEX1O43933 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX1O43933 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX1O43933 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.93■■□□□ 1.1
PEX1O43933 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PEX1O43933 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PEX1O43933 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX1O43933 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.92■■□□□ 1.1
PEX1O43933 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX1O43933 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.92■■□□□ 1.1
PEX1O43933 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.92■■□□□ 1.1
PEX1O43933 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PEX1O43933 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PEX1O43933 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 C1orf229-201ENST00000623686 2258 ntBASIC21.91■■□□□ 1.1
PEX1O43933 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX1O43933 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 AC103724.3-201ENST00000564481 992 ntBASIC21.91■■□□□ 1.1
PEX1O43933 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX1O43933 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.91■■□□□ 1.1
PEX1O43933 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
PEX1O43933 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PEX1O43933 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.9■■□□□ 1.1
PEX1O43933 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX1O43933 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PEX1O43933 MIR6089-201ENST00000616698 64 ntBASIC21.9■■□□□ 1.1
PEX1O43933 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.9■■□□□ 1.1
PEX1O43933 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX1O43933 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PEX1O43933 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PEX1O43933 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PEX1O43933 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
PEX1O43933 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PEX1O43933 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PEX1O43933 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PEX1O43933 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
PEX1O43933 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PEX1O43933 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.89■■□□□ 1.09
PEX1O43933 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 AC009299.2-201ENST00000482477 511 ntBASIC21.89■■□□□ 1.09
PEX1O43933 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.89■■□□□ 1.09
PEX1O43933 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 AL031848.2-201ENST00000607670 837 ntBASIC21.89■■□□□ 1.09
PEX1O43933 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.89■■□□□ 1.09
PEX1O43933 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PEX1O43933 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.89■■□□□ 1.09
PEX1O43933 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PEX1O43933 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.88■■□□□ 1.09
PEX1O43933 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PEX1O43933 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PEX1O43933 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PEX1O43933 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PEX1O43933 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PEX1O43933 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PEX1O43933 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PEX1O43933 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PEX1O43933 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.87■■□□□ 1.09
PEX1O43933 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.87■■□□□ 1.09
PEX1O43933 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.87■■□□□ 1.09
PEX1O43933 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PEX1O43933 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms