Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.27■■□□□ 1.48
TRANK1O15050 AC104771.1-201ENST00000603335 964 ntBASIC24.27■■□□□ 1.48
TRANK1O15050 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRANK1O15050 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRANK1O15050 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRANK1O15050 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRANK1O15050 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRANK1O15050 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.27■■□□□ 1.48
TRANK1O15050 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRANK1O15050 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.26■■□□□ 1.47
TRANK1O15050 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
TRANK1O15050 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.26■■□□□ 1.47
TRANK1O15050 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
TRANK1O15050 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRANK1O15050 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRANK1O15050 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRANK1O15050 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRANK1O15050 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TRANK1O15050 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRANK1O15050 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRANK1O15050 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.25■■□□□ 1.47
TRANK1O15050 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRANK1O15050 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.24■■□□□ 1.47
TRANK1O15050 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRANK1O15050 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRANK1O15050 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TRANK1O15050 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRANK1O15050 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.23■■□□□ 1.47
TRANK1O15050 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRANK1O15050 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.23■■□□□ 1.47
TRANK1O15050 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TRANK1O15050 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.22■■□□□ 1.47
TRANK1O15050 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.22■■□□□ 1.47
TRANK1O15050 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRANK1O15050 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.22■■□□□ 1.47
TRANK1O15050 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.22■■□□□ 1.47
TRANK1O15050 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRANK1O15050 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRANK1O15050 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.22■■□□□ 1.47
TRANK1O15050 AC066615.1-201ENST00000640911 628 ntBASIC24.22■■□□□ 1.47
TRANK1O15050 CDCA4P2-201ENST00000441182 718 ntBASIC24.21■■□□□ 1.47
TRANK1O15050 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.21■■□□□ 1.47
TRANK1O15050 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRANK1O15050 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.21■■□□□ 1.47
TRANK1O15050 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRANK1O15050 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.21■■□□□ 1.47
TRANK1O15050 AC126544.1-201ENST00000580842 1059 ntBASIC24.21■■□□□ 1.47
TRANK1O15050 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.21■■□□□ 1.47
TRANK1O15050 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.21■■□□□ 1.47
TRANK1O15050 NTF6G-201ENST00000591094 616 ntBASIC24.21■■□□□ 1.47
TRANK1O15050 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
TRANK1O15050 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
TRANK1O15050 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
TRANK1O15050 AC010501.1-201ENST00000606270 1962 ntBASIC24.2■■□□□ 1.47
TRANK1O15050 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRANK1O15050 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
TRANK1O15050 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRANK1O15050 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRANK1O15050 IGHV3-19-201ENST00000521488 291 ntBASIC24.2■■□□□ 1.46
TRANK1O15050 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.2■■□□□ 1.46
TRANK1O15050 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
TRANK1O15050 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.19■■□□□ 1.46
TRANK1O15050 AL354811.1-201ENST00000610286 706 ntBASIC24.19■■□□□ 1.46
TRANK1O15050 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.19■■□□□ 1.46
TRANK1O15050 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.19■■□□□ 1.46
TRANK1O15050 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.19■■□□□ 1.46
TRANK1O15050 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TRANK1O15050 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.18■■□□□ 1.46
TRANK1O15050 MIR6084-201ENST00000622012 110 ntBASIC24.18■■□□□ 1.46
TRANK1O15050 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.18■■□□□ 1.46
TRANK1O15050 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.18■■□□□ 1.46
TRANK1O15050 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TRANK1O15050 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
TRANK1O15050 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.18■■□□□ 1.46
TRANK1O15050 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRANK1O15050 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
TRANK1O15050 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRANK1O15050 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.17■■□□□ 1.46
TRANK1O15050 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRANK1O15050 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.17■■□□□ 1.46
TRANK1O15050 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRANK1O15050 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRANK1O15050 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms