Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CASQ2O14958 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 AC148477.6-201ENST00000623746 465 ntBASIC21.56■■□□□ 1.04
CASQ2O14958 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CASQ2O14958 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASQ2O14958 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CASQ2O14958 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.55■■□□□ 1.04
CASQ2O14958 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASQ2O14958 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASQ2O14958 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASQ2O14958 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CASQ2O14958 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CASQ2O14958 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CASQ2O14958 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.54■■□□□ 1.04
CASQ2O14958 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.54■■□□□ 1.04
CASQ2O14958 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.54■■□□□ 1.04
CASQ2O14958 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CASQ2O14958 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CASQ2O14958 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CASQ2O14958 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.54■■□□□ 1.04
CASQ2O14958 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CASQ2O14958 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CASQ2O14958 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.52■■□□□ 1.04
CASQ2O14958 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.52■■□□□ 1.04
CASQ2O14958 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CASQ2O14958 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
CASQ2O14958 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.52■■□□□ 1.04
CASQ2O14958 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.52■■□□□ 1.04
CASQ2O14958 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CASQ2O14958 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.52■■□□□ 1.04
CASQ2O14958 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CASQ2O14958 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CASQ2O14958 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
CASQ2O14958 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASQ2O14958 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASQ2O14958 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CASQ2O14958 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CASQ2O14958 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
CASQ2O14958 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.51■■□□□ 1.03
CASQ2O14958 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.5■■□□□ 1.03
CASQ2O14958 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CASQ2O14958 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.5■■□□□ 1.03
CASQ2O14958 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.5■■□□□ 1.03
CASQ2O14958 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CASQ2O14958 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.5■■□□□ 1.03
CASQ2O14958 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CASQ2O14958 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASQ2O14958 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CASQ2O14958 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASQ2O14958 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CASQ2O14958 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CASQ2O14958 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.49■■□□□ 1.03
CASQ2O14958 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.49■■□□□ 1.03
CASQ2O14958 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CASQ2O14958 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CASQ2O14958 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CASQ2O14958 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CASQ2O14958 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CASQ2O14958 AC008813.1-201ENST00000536597 885 ntBASIC21.48■■□□□ 1.03
CASQ2O14958 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CASQ2O14958 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CASQ2O14958 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CASQ2O14958 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.47■■□□□ 1.03
CASQ2O14958 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CASQ2O14958 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CASQ2O14958 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 MIR3665-201ENST00000578708 105 ntBASIC21.46■■□□□ 1.03
CASQ2O14958 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CASQ2O14958 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CASQ2O14958 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CASQ2O14958 ESRRAP2-201ENST00000418437 1549 ntBASIC21.45■■□□□ 1.02
CASQ2O14958 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms