Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
IFRD1O00458 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.37■■□□□ 1.17
IFRD1O00458 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
IFRD1O00458 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.37■■□□□ 1.17
IFRD1O00458 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.37■■□□□ 1.17
IFRD1O00458 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
IFRD1O00458 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
IFRD1O00458 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.37■■□□□ 1.17
IFRD1O00458 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.37■■□□□ 1.17
IFRD1O00458 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
IFRD1O00458 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.36■■□□□ 1.17
IFRD1O00458 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.36■■□□□ 1.17
IFRD1O00458 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
IFRD1O00458 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
IFRD1O00458 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
IFRD1O00458 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
IFRD1O00458 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
IFRD1O00458 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
IFRD1O00458 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
IFRD1O00458 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
IFRD1O00458 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
IFRD1O00458 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
IFRD1O00458 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.35■■□□□ 1.17
IFRD1O00458 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
IFRD1O00458 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
IFRD1O00458 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.34■■□□□ 1.17
IFRD1O00458 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IFRD1O00458 AC004812.2-201ENST00000611079 2094 ntBASIC22.34■■□□□ 1.17
IFRD1O00458 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IFRD1O00458 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IFRD1O00458 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.34■■□□□ 1.17
IFRD1O00458 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
IFRD1O00458 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
IFRD1O00458 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.34■■□□□ 1.17
IFRD1O00458 AC005703.6-201ENST00000623265 1329 ntBASIC22.33■■□□□ 1.17
IFRD1O00458 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
IFRD1O00458 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
IFRD1O00458 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
IFRD1O00458 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.33■■□□□ 1.17
IFRD1O00458 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
IFRD1O00458 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.33■■□□□ 1.17
IFRD1O00458 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
IFRD1O00458 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.33■■□□□ 1.17
IFRD1O00458 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.33■■□□□ 1.17
IFRD1O00458 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.33■■□□□ 1.17
IFRD1O00458 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
IFRD1O00458 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
IFRD1O00458 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
IFRD1O00458 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
IFRD1O00458 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.32■■□□□ 1.16
IFRD1O00458 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
IFRD1O00458 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IFRD1O00458 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.32■■□□□ 1.16
IFRD1O00458 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
IFRD1O00458 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.32■■□□□ 1.16
IFRD1O00458 AC131212.1-201ENST00000613771 668 ntBASIC22.32■■□□□ 1.16
IFRD1O00458 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.32■■□□□ 1.16
IFRD1O00458 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IFRD1O00458 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
IFRD1O00458 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
IFRD1O00458 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.32■■□□□ 1.16
IFRD1O00458 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
IFRD1O00458 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.31■■□□□ 1.16
IFRD1O00458 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.31■■□□□ 1.16
IFRD1O00458 DUSP8P5-201ENST00000422884 1815 ntBASIC22.31■■□□□ 1.16
IFRD1O00458 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
IFRD1O00458 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
IFRD1O00458 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
IFRD1O00458 ALDH1A3-203ENST00000557963 1670 ntBASIC22.31■■□□□ 1.16
IFRD1O00458 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
IFRD1O00458 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.31■■□□□ 1.16
IFRD1O00458 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
IFRD1O00458 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.31■■□□□ 1.16
IFRD1O00458 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
IFRD1O00458 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.3■■□□□ 1.16
IFRD1O00458 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.3■■□□□ 1.16
IFRD1O00458 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
IFRD1O00458 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.3■■□□□ 1.16
IFRD1O00458 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IFRD1O00458 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
IFRD1O00458 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
IFRD1O00458 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
IFRD1O00458 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
IFRD1O00458 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
IFRD1O00458 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.29■■□□□ 1.16
IFRD1O00458 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.29■■□□□ 1.16
IFRD1O00458 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.29■■□□□ 1.16
IFRD1O00458 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFRD1O00458 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
IFRD1O00458 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFRD1O00458 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFRD1O00458 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFRD1O00458 AL356740.2-201ENST00000601559 647 ntBASIC22.28■■□□□ 1.16
IFRD1O00458 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms