Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPSF4LA6NMK7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 TSPY13P-201ENST00000338964 914 ntBASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 AC092068.2-201ENST00000590491 1708 ntBASIC20.87■□□□□ 0.93
CPSF4LA6NMK7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 AC074183.2-201ENST00000623112 922 ntBASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPSF4LA6NMK7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 THA1P-201ENST00000590384 1145 ntBASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CPSF4LA6NMK7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPSF4LA6NMK7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPSF4LA6NMK7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.83■□□□□ 0.93
CPSF4LA6NMK7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.83■□□□□ 0.93
CPSF4LA6NMK7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CPSF4LA6NMK7 DUSP8P3-201ENST00000399571 1760 ntBASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 MIR4281-201ENST00000580852 62 ntBASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CPSF4LA6NMK7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 AF131216.4-201ENST00000638924 1588 ntBASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 KRT18P24-201ENST00000344739 1156 ntBASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPSF4LA6NMK7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPSF4LA6NMK7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms