Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 AL161729.1-201ENST00000604104 1402 ntBASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.1■□□□□ 0.01
LRCOL1A6NCL2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 AL139246.5-201ENST00000606645 996 ntBASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCOL1A6NCL2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
LRCOL1A6NCL2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRCOL1A6NCL2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCOL1A6NCL2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.08■□□□□ 0
LRCOL1A6NCL2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.08■□□□□ 0
LRCOL1A6NCL2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.08■□□□□ 0
LRCOL1A6NCL2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRCOL1A6NCL2 AC019069.1-201ENST00000610008 1333 ntBASIC15.08■□□□□ 0
LRCOL1A6NCL2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCOL1A6NCL2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRCOL1A6NCL2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCOL1A6NCL2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.08■□□□□ 0
LRCOL1A6NCL2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.07■□□□□ 0
LRCOL1A6NCL2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.07■□□□□ 0
LRCOL1A6NCL2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 AC110285.6-201ENST00000617652 491 ntBASIC15.07■□□□□ 0
LRCOL1A6NCL2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LRCOL1A6NCL2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRCOL1A6NCL2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRCOL1A6NCL2 AC142381.3-201ENST00000568208 1670 ntBASIC15.06■□□□□ 0
LRCOL1A6NCL2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 MIR638-201ENST00000385237 100 ntBASIC15.06■□□□□ 0
LRCOL1A6NCL2 AC096631.2-201ENST00000436136 790 ntBASIC15.06■□□□□ 0
LRCOL1A6NCL2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.06■□□□□ 0
LRCOL1A6NCL2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.06■□□□□ 0
LRCOL1A6NCL2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRCOL1A6NCL2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRCOL1A6NCL2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRCOL1A6NCL2 AC138932.3-201ENST00000567634 1902 ntBASIC15.05■□□□□ 0
LRCOL1A6NCL2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LRCOL1A6NCL2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LRCOL1A6NCL2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCOL1A6NCL2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRCOL1A6NCL2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.05■□□□□ -0
LRCOL1A6NCL2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRCOL1A6NCL2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms