Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.03■□□□□ 0.96
TRBV11-1A0A0K0K1C0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRBV11-1A0A0K0K1C0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV11-1A0A0K0K1C0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV11-1A0A0K0K1C0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 AC096631.2-201ENST00000436136 790 ntBASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV11-1A0A0K0K1C0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 AC004812.2-201ENST00000611079 2094 ntBASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 C17orf82-201ENST00000623772 1530 ntBASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 AL139246.5-201ENST00000606645 996 ntBASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV11-1A0A0K0K1C0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV11-1A0A0K0K1C0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms