Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 LINC01124-201ENST00000409786 2117 ntBASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
IGHV4-28A0A0C4DH34 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.35■□□□□ 0.21
IGHV4-28A0A0C4DH34 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IGHV4-28A0A0C4DH34 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IGHV4-28A0A0C4DH34 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IGHV4-28A0A0C4DH34 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
IGHV4-28A0A0C4DH34 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IGHV4-28A0A0C4DH34 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 AC096631.2-201ENST00000436136 790 ntBASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 AC009102.2-201ENST00000606772 1639 ntBASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 AL139125.2-201ENST00000623134 1869 ntBASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.33■□□□□ 0.2
IGHV4-28A0A0C4DH34 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 AC141586.4-201ENST00000624558 1573 ntBASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.32■□□□□ 0.2
IGHV4-28A0A0C4DH34 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 AL139246.5-201ENST00000606645 996 ntBASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 LINC00543-201ENST00000567234 1845 ntBASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGHV4-28A0A0C4DH34 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.3■□□□□ 0.2
IGHV4-28A0A0C4DH34 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGHV4-28A0A0C4DH34 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms