Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 LONRF2P2-201ENST00000439212 571 ntBASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV21A0A0B4J279 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 DUSP8P3-201ENST00000399571 1760 ntBASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV21A0A0B4J279 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV21A0A0B4J279 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 AL117328.2-201ENST00000624617 1940 ntBASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV21A0A0B4J279 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAV21A0A0B4J279 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 AC022616.5-201ENST00000518796 181 ntBASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV21A0A0B4J279 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 RARRES2P2-201ENST00000394842 485 ntBASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 ALDH1A3-203ENST00000557963 1670 ntBASIC16.77■□□□□ 0.28
TRAV21A0A0B4J279 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV21A0A0B4J279 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV21A0A0B4J279 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV21A0A0B4J279 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 AC233723.2-201ENST00000623798 2106 ntBASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV21A0A0B4J279 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms