Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV12-1A0A0B4J245 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV12-1A0A0B4J245 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 C11orf96-202ENST00000528572 1834 ntBASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV12-1A0A0B4J245 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 AC092053.2-201ENST00000640557 1818 ntBASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 AL121603.2-201ENST00000557373 2117 ntBASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV12-1A0A0B4J245 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TRAV12-1A0A0B4J245 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 CHML-204ENST00000638121 920 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV12-1A0A0B4J245 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 AL161729.1-201ENST00000604104 1402 ntBASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 CHST11-203ENST00000547956 936 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV12-1A0A0B4J245 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms