Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-1A0A0A6YYK1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PKD1P6-201ENST00000343738 4769 ntBASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-1A0A0A6YYK1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 LINC00526-201ENST00000581067 1875 ntBASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 AC009831.1-201ENST00000580420 1582 ntBASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-1A0A0A6YYK1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRAV8-1A0A0A6YYK1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 AL161729.1-201ENST00000604104 1402 ntBASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 RPS2P7-201ENST00000447334 885 ntBASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 AC133552.2-201ENST00000619106 1032 ntBASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms