Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 TSPY26P-201ENST00000476365 1326 ntBASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSANTD3-TMEFF1A0A0A6YYJ0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 KRT18P5-201ENST00000436075 1291 ntBASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 YBX1P1-201ENST00000445822 960 ntBASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 AL137784.2-201ENST00000607332 1000 ntBASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SLC47A1P1-202ENST00000449666 945 ntBASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L2-201ENST00000561772 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L6-201ENST00000626483 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L1-201ENST00000627662 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L8-201ENST00000629013 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L3-201ENST00000630187 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L7-201ENST00000630678 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DUX4L5-201ENST00000630834 1275 ntBASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.52■■□□□ 1.2
MSANTD3-TMEFF1A0A0A6YYJ0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
MSANTD3-TMEFF1A0A0A6YYJ0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.51■■□□□ 1.19
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
MSANTD3-TMEFF1A0A0A6YYJ0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms