Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AC004835.2-201ENST00000603762 682 ntBASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AP001059.3-201ENST00000619053 235 ntBASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 AL603764.1-201ENST00000636452 321 ntBASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
KCNIP3Q9Y2W7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 SLC25A1P1-201ENST00000528351 927 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AL512361.1-201ENST00000554200 418 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AC093520.2-201ENST00000561830 333 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 DUX4L47-201ENST00000566374 394 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AL596442.2-201ENST00000610240 980 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AC068760.1-201ENST00000493579 1953 ntBASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
KCNIP3Q9Y2W7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KCNIP3Q9Y2W7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms