Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 TNRC18P2-201ENST00000417666 2714 ntBASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AL512599.1-201ENST00000430724 685 ntBASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 MIR4326-201ENST00000582203 59 ntBASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHANK2Q9UPX8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 FAM21EP-201ENST00000417804 985 ntBASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 AC023141.7-201ENST00000430646 407 ntBASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 RN7SL147P-201ENST00000487345 298 ntBASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 AC126755.5-201ENST00000622756 267 ntBASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.93■□□□□ 0.94
SHANK2Q9UPX8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 MIR1301-201ENST00000408518 82 ntBASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 AP000769.1-203ENST00000637245 208 ntBASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHANK2Q9UPX8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 MIR566-201ENST00000385187 94 ntBASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 AC090136.2-201ENST00000517809 420 ntBASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 AC004686.1-201ENST00000605113 538 ntBASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHANK2Q9UPX8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms