Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AL583810.1-201ENST00000553344 1045 ntBASIC15.08■□□□□ 0
AP4E1Q9UPM8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AL096828.3-201ENST00000615354 462 ntBASIC15.08■□□□□ 0
AP4E1Q9UPM8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.08■□□□□ 0
AP4E1Q9UPM8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 TUBB8P4-201ENST00000511806 1324 ntBASIC15.08■□□□□ 0
AP4E1Q9UPM8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.08■□□□□ 0
AP4E1Q9UPM8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
AP4E1Q9UPM8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 REXO1L6P-201ENST00000603433 1515 ntBASIC15.07■□□□□ 0
AP4E1Q9UPM8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 MST1P2-201ENST00000457982 2291 ntBASIC15.07■□□□□ 0
AP4E1Q9UPM8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 BTBD6P1-201ENST00000412176 1267 ntBASIC15.07■□□□□ 0
AP4E1Q9UPM8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 GOLGA2P4-201ENST00000441462 777 ntBASIC15.07■□□□□ 0
AP4E1Q9UPM8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 AL022313.4-201ENST00000562756 2046 ntBASIC15.07■□□□□ 0
AP4E1Q9UPM8 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
AP4E1Q9UPM8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
AP4E1Q9UPM8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.06■□□□□ 0
AP4E1Q9UPM8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.06■□□□□ 0
AP4E1Q9UPM8 ST13P19-201ENST00000442505 1124 ntBASIC15.06■□□□□ 0
AP4E1Q9UPM8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms