Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AL136309.1-201ENST00000403917 691 ntBASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 HMGN1P19-201ENST00000436976 333 ntBASIC14.12□□□□□ -0.15
SNX6Q9UNH7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 COX5BP1-201ENST00000507622 393 ntBASIC14.12□□□□□ -0.15
SNX6Q9UNH7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 CU639417.3-201ENST00000624240 1404 ntBASIC14.12□□□□□ -0.15
SNX6Q9UNH7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNX6Q9UNH7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 CNN2P8-201ENST00000421872 913 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 KRT43P-201ENST00000434019 910 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AC007551.1-201ENST00000457394 519 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 COL6A4P2-202ENST00000504443 2753 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AP003171.2-201ENST00000528208 925 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AL596325.1-201ENST00000563991 1082 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 MIR4683-201ENST00000579659 81 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 AC027601.3-201ENST00000622907 509 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 TUBB8P4-201ENST00000511806 1324 ntBASIC14.11□□□□□ -0.15
SNX6Q9UNH7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.11□□□□□ -0.15
SNX6Q9UNH7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms