Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AF274858.1-201ENST00000406288 372 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 RPL3P5-201ENST00000441645 1232 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC023906.1-201ENST00000486386 453 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC008026.2-201ENST00000495438 348 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 BX088702.1-201ENST00000610784 235 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AL118522.1-201ENST00000611368 560 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 SALL4P5-201ENST00000419001 1760 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AC006486.2-201ENST00000624246 2199 ntBASIC14.36□□□□□ -0.11
NCDNQ9UBB6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.36□□□□□ -0.11
NCDNQ9UBB6 AL109809.1-201ENST00000418979 1367 ntBASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PTGER4P2-201ENST00000328411 252 ntBASIC14.35□□□□□ -0.11
NCDNQ9UBB6 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PTGER4P3-201ENST00000458150 252 ntBASIC14.35□□□□□ -0.11
NCDNQ9UBB6 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 KRT8P1-201ENST00000557533 1207 ntBASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.35□□□□□ -0.11
NCDNQ9UBB6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCDNQ9UBB6 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCDNQ9UBB6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCDNQ9UBB6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCDNQ9UBB6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NCDNQ9UBB6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 272.7 ms