Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RTN4Q9NQC3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 F7-206ENST00000541084 2873 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 RPS8P6-201ENST00000426177 609 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 BOLA2P2-202ENST00000604904 567 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 FAM90A11P-201ENST00000518378 2218 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AL021155.1-201ENST00000438808 2637 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 AL136982.4-201ENST00000437689 1740 ntBASIC17.44■□□□□ 0.38
RTN4Q9NQC3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4Q9NQC3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TNKS-213ENST00000522110 2900 ntBASIC17.43■□□□□ 0.38
RTN4Q9NQC3 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AC007967.2-201ENST00000432613 625 ntBASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 RARRES2P8-201ENST00000566335 367 ntBASIC17.43■□□□□ 0.38
RTN4Q9NQC3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AL513190.1-201ENST00000621254 727 ntBASIC17.43■□□□□ 0.38
RTN4Q9NQC3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RTN4Q9NQC3 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms