Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 FAM197Y7-201ENST00000432892 766 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC016694.1-201ENST00000434179 700 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 BCRP2-202ENST00000447763 634 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 BCRP6-201ENST00000510112 632 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 BCRP7-201ENST00000511549 544 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 KRT90P-201ENST00000549264 1064 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AL033527.4-201ENST00000641026 673 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TUBB8P4-201ENST00000511806 1324 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 AL133338.1-201ENST00000565695 1517 ntBASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AC104989.1-201ENST00000519711 778 ntBASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AP003171.2-201ENST00000528208 925 ntBASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 AC005586.2-201ENST00000563946 837 ntBASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 RN7SL713P-201ENST00000582127 302 ntBASIC13.78□□□□□ -0.2
NEUROD4Q9HD90 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms