Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 KLF2P3-201ENST00000451977 1087 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC067863.1-201ENST00000494933 530 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC044860.1-202ENST00000559481 777 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC103988.2-201ENST00000561804 725 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC036164.1-201ENST00000570544 333 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AL138828.2-201ENST00000615812 383 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 AC139712.1-201ENST00000378256 1875 ntBASIC11.85□□□□□ -0.51
RAB40CQ96S21 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.85□□□□□ -0.51
RAB40CQ96S21 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RAB40CQ96S21 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 FAM86GP-201ENST00000448322 971 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC114812.1-204ENST00000449669 728 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC125807.1-201ENST00000483097 614 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 GIMAP3P-201ENST00000495150 836 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC015911.4-201ENST00000588022 1070 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 AC087499.5-201ENST00000452760 1342 ntBASIC11.84□□□□□ -0.51
RAB40CQ96S21 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB40CQ96S21 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
RAB40CQ96S21 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
RAB40CQ96S21 AC019294.4-201ENST00000561777 2905 ntBASIC11.83□□□□□ -0.51
RAB40CQ96S21 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.83□□□□□ -0.51
RAB40CQ96S21 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
RAB40CQ96S21 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.83□□□□□ -0.51
RAB40CQ96S21 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms