Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 LAP3P2-201ENST00000454686 1454 ntBASIC14.95□□□□□ -0.02
CSPG4P5Q96PW8 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 USP17L6P-201ENST00000382470 1197 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC021723.1-201ENST00000486306 515 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC124068.2-201ENST00000569473 1109 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC005324.6-201ENST00000587972 613 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC021016.3-201ENST00000608367 477 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC133540.1-201ENST00000620845 1019 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 KRT8P29-201ENST00000420409 1371 ntBASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.94□□□□□ -0.02
CSPG4P5Q96PW8 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 VDAC1P1-201ENST00000439229 848 ntBASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 RNMTL1P1-201ENST00000454103 560 ntBASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 RPL18P13-201ENST00000478088 569 ntBASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 SCARNA21-201ENST00000517026 139 ntBASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.93□□□□□ -0.02
CSPG4P5Q96PW8 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms