Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 PGAM1P11-201ENST00000416729 680 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 BX088651.3-201ENST00000418155 352 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 PEBP1P3-201ENST00000455475 548 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 AC004223.2-201ENST00000590309 544 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 AC006986.1-201ENST00000612764 241 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 IFNWP2-201ENST00000431203 580 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 AL356000.1-201ENST00000441073 1238 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 OR2R1P-201ENST00000441404 914 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 RN7SL69P-201ENST00000468423 272 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 MIR4640-201ENST00000581824 90 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 AL357143.1-203ENST00000639750 881 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 AC009452.1-201ENST00000640823 606 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 TEKT4P2-202ENST00000559466 1312 ntBASIC15.62■□□□□ 0.09
LRCH3Q96II8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.62■□□□□ 0.09
LRCH3Q96II8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRCH3Q96II8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms