Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 AC109322.1-201ENST00000524499 1264 ntBASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 AC000095.1-201ENST00000603208 874 ntBASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHMP6Q96FZ7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 AL136172.1-201ENST00000598590 1394 ntBASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHMP6Q96FZ7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 MARK2P9-201ENST00000430958 1727 ntBASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AL391647.1-201ENST00000395664 511 ntBASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AC023511.2-201ENST00000618803 211 ntBASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 AL158070.2-201ENST00000623713 1621 ntBASIC14.7□□□□□ -0.06
CHMP6Q96FZ7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 AC009474.1-201ENST00000455096 1565 ntBASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 AL355102.3-201ENST00000554299 1678 ntBASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.69□□□□□ -0.06
CHMP6Q96FZ7 LINC01115-203ENST00000606068 577 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms