Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 HIST2H2BB-201ENST00000449108 381 ntBASIC17.31■□□□□ 0.36
DDX11Q96FC9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 MESTP3-201ENST00000503460 968 ntBASIC17.31■□□□□ 0.36
DDX11Q96FC9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.31■□□□□ 0.36
DDX11Q96FC9 AP001002.3-201ENST00000623482 206 ntBASIC17.31■□□□□ 0.36
DDX11Q96FC9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 AP003171.2-201ENST00000528208 925 ntBASIC17.3■□□□□ 0.36
DDX11Q96FC9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 NDUFV2P1-201ENST00000596415 907 ntBASIC17.3■□□□□ 0.36
DDX11Q96FC9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 MYADML-201ENST00000474610 2147 ntBASIC17.3■□□□□ 0.36
DDX11Q96FC9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DDX11Q96FC9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DDX11Q96FC9 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 CICP16-201ENST00000502609 2813 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AL662890.1-201ENST00000396818 632 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 CHMP1AP1-201ENST00000445563 662 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 SERPINA13P-202ENST00000478994 924 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 AC100850.1-201ENST00000506768 649 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 GCOM2-201ENST00000509133 1104 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX11Q96FC9 AC106872.11-201ENST00000605838 421 ntBASIC17.29■□□□□ 0.36
DDX11Q96FC9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX11Q96FC9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms