Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
AP3S1Q92572 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AP3S1Q92572 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 AL353779.1-201ENST00000434793 351 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 FAM58CP-201ENST00000435741 640 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 AL592309.1-201ENST00000443127 649 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 ALG1L8P-201ENST00000533887 760 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.84□□□□□ -0.35
AP3S1Q92572 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 AL033527.5-202ENST00000641632 1098 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 AC092902.6-201ENST00000641783 218 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
AP3S1Q92572 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 AL359845.1-201ENST00000458202 1648 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 AL022323.5-201ENST00000624101 2059 ntBASIC12.84□□□□□ -0.35
AP3S1Q92572 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
AP3S1Q92572 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP3S1Q92572 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S1Q92572 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
AP3S1Q92572 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S1Q92572 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
AP3S1Q92572 CICP1-201ENST00000416803 2410 ntBASIC12.83□□□□□ -0.35
AP3S1Q92572 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.83□□□□□ -0.35
AP3S1Q92572 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.83□□□□□ -0.35
AP3S1Q92572 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
AP3S1Q92572 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S1Q92572 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 USP17L6P-201ENST00000382470 1197 ntBASIC12.83□□□□□ -0.36
AP3S1Q92572 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 NUS1P3-201ENST00000423502 862 ntBASIC12.83□□□□□ -0.36
AP3S1Q92572 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S1Q92572 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S1Q92572 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 EMBP1-201ENST00000458200 901 ntBASIC12.83□□□□□ -0.36
AP3S1Q92572 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.83□□□□□ -0.36
AP3S1Q92572 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.83□□□□□ -0.36
AP3S1Q92572 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 AC004461.2-201ENST00000629517 803 ntBASIC12.83□□□□□ -0.36
AP3S1Q92572 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AP3S1Q92572 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.83□□□□□ -0.36
AP3S1Q92572 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP3S1Q92572 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms