Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ACTBP11-201ENST00000436287 1126 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AL391280.1-201ENST00000506969 1062 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AP006547.1-201ENST00000563435 692 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 DUX4L45-201ENST00000566406 1057 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC097065.2-201ENST00000608159 533 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 INE2-201ENST00000630399 1874 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AL354989.2-201ENST00000435838 1540 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 KHSRPP1-201ENST00000427983 1768 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 SYT14P1-202ENST00000600441 1448 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 TUBB1P2-201ENST00000422712 1306 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 TUBB1P1-201ENST00000503144 1300 ntBASIC14.9□□□□□ -0.02
PTCD2Q8WV60 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PTCD2Q8WV60 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 RN7SKP175-201ENST00000408472 289 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AL355994.2-201ENST00000447882 704 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC108725.1-201ENST00000495472 409 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 C2orf69P2-201ENST00000562032 1123 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 RN7SL560P-201ENST00000577943 264 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 OR10B1P-201ENST00000601666 907 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC215219.1-201ENST00000400706 1817 ntBASIC14.89□□□□□ -0.03
PTCD2Q8WV60 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCD2Q8WV60 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms