Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 CRB3P1-201ENST00000449338 276 ntBASIC14.32□□□□□ -0.12
RDH11Q8TC12 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 CTBP2P3-201ENST00000585629 1255 ntBASIC14.32□□□□□ -0.12
RDH11Q8TC12 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.32□□□□□ -0.12
RDH11Q8TC12 WFDC1-204ENST00000613603 549 ntBASIC14.32□□□□□ -0.12
RDH11Q8TC12 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RDH11Q8TC12 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RDH11Q8TC12 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 TPM3P8-201ENST00000330554 643 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 AK2P2-201ENST00000439142 405 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 AC008825.2-201ENST00000603374 718 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 AC134312.5-201ENST00000568031 1313 ntBASIC14.31□□□□□ -0.12
RDH11Q8TC12 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.31□□□□□ -0.12
RDH11Q8TC12 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RDH11Q8TC12 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms