Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 KRT17P4-201ENST00000429445 819 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 FAM86KP-201ENST00000509817 987 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AC068867.1-201ENST00000559855 150 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 RN7SL357P-201ENST00000581065 298 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AC002044.2-201ENST00000624910 970 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 MROH4P-201ENST00000431302 1578 ntBASIC15.65■□□□□ 0.1
HERC6Q8IVU3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
HERC6Q8IVU3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 AC021305.1-201ENST00000520656 1514 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 FAM86B3P-203ENST00000523992 854 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 OR5BD1P-201ENST00000532527 817 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 AC055811.3-201ENST00000584952 686 ntBASIC15.64■□□□□ 0.09
HERC6Q8IVU3 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HERC6Q8IVU3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.63■□□□□ 0.09
HERC6Q8IVU3 MIR645-201ENST00000385283 94 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms