Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 IGKV1OR-2-201ENST00000457995 350 ntBASIC17.81■□□□□ 0.44
COL23A1Q86Y22 RN7SL846P-201ENST00000467429 292 ntBASIC17.81■□□□□ 0.44
COL23A1Q86Y22 ALG1L15P-201ENST00000482834 794 ntBASIC17.81■□□□□ 0.44
COL23A1Q86Y22 AP000920.1-201ENST00000531824 344 ntBASIC17.81■□□□□ 0.44
COL23A1Q86Y22 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL23A1Q86Y22 TMBIM7P-203ENST00000641617 1718 ntBASIC17.81■□□□□ 0.44
COL23A1Q86Y22 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 ABCD1P4-201ENST00000399687 604 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 GGTLC4P-201ENST00000402176 664 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 ZNF877P-201ENST00000437614 612 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 CDK4P1-201ENST00000454213 828 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 DPY19L2P4-201ENST00000479881 442 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 AC005746.3-201ENST00000614751 393 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 BX322534.1-201ENST00000635574 241 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 AC215524.1-201ENST00000635696 241 ntBASIC17.8■□□□□ 0.44
COL23A1Q86Y22 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.8■□□□□ 0.44
COL23A1Q86Y22 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 LINC00554-201ENST00000564841 3011 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 RPSAP12-201ENST00000435879 888 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms