Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC007389.4-201ENST00000454674 793 ntBASIC13.02□□□□□ -0.33
LRRC28Q86X40 VDAC1P7-201ENST00000462417 847 ntBASIC13.02□□□□□ -0.33
LRRC28Q86X40 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 AC026410.3-201ENST00000514280 936 ntBASIC13.02□□□□□ -0.33
LRRC28Q86X40 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 AC120045.2-201ENST00000567334 178 ntBASIC13.02□□□□□ -0.33
LRRC28Q86X40 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRC28Q86X40 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LRRC28Q86X40 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 C1QBPP1-201ENST00000400117 770 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AC093813.1-201ENST00000605066 256 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CU634019.7-201ENST00000624153 1185 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 FP236241.2-201ENST00000624906 1185 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 DRD5P1-201ENST00000456605 1438 ntBASIC13.01□□□□□ -0.33
LRRC28Q86X40 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LRRC28Q86X40 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRC28Q86X40 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13□□□□□ -0.33
LRRC28Q86X40 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LRRC28Q86X40 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LRRC28Q86X40 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LRRC28Q86X40 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRC28Q86X40 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
LRRC28Q86X40 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
LRRC28Q86X40 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13□□□□□ -0.33
LRRC28Q86X40 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13□□□□□ -0.33
LRRC28Q86X40 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13□□□□□ -0.33
LRRC28Q86X40 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LRRC28Q86X40 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
LRRC28Q86X40 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms