Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AC025183.3-201ENST00000623526 1482 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 HLA-DPA2-205ENST00000433582 733 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RPL18AP8-201ENST00000486071 528 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AC003686.1-201ENST00000550956 1034 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AL590440.2-201ENST00000641973 1595 ntBASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OTOP1Q7RTM1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC108734.2-201ENST00000420887 1069 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 GNG10P1-201ENST00000452289 199 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 RN7SL23P-201ENST00000484055 275 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 RN7SL582P-201ENST00000491078 279 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 OR5BD1P-201ENST00000532527 817 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC006483.2-201ENST00000609813 515 ntBASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OTOP1Q7RTM1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
OTOP1Q7RTM1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms