Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.59□□□□□ -0.23
PER3P56645 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.59□□□□□ -0.23
PER3P56645 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PER3P56645 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PER3P56645 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PER3P56645 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PER3P56645 HSPA7-201ENST00000445535 1927 ntBASIC13.58□□□□□ -0.23
PER3P56645 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PER3P56645 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PER3P56645 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.58□□□□□ -0.23
PER3P56645 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.58□□□□□ -0.24
PER3P56645 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.58□□□□□ -0.24
PER3P56645 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.58□□□□□ -0.24
PER3P56645 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.58□□□□□ -0.24
PER3P56645 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.58□□□□□ -0.24
PER3P56645 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 AL645728.2-202ENST00000641679 227 ntBASIC13.58□□□□□ -0.24
PER3P56645 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 TUBBP5-203ENST00000508529 1334 ntBASIC13.58□□□□□ -0.24
PER3P56645 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PER3P56645 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PER3P56645 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.58□□□□□ -0.24
PER3P56645 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PER3P56645 KRT8P29-201ENST00000420409 1371 ntBASIC13.58□□□□□ -0.24
PER3P56645 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.58□□□□□ -0.24
PER3P56645 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 KRT8P14-201ENST00000414254 1442 ntBASIC13.57□□□□□ -0.24
PER3P56645 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 RPL17P11-201ENST00000417593 544 ntBASIC13.57□□□□□ -0.24
PER3P56645 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.57□□□□□ -0.24
PER3P56645 RN7SL818P-201ENST00000485099 259 ntBASIC13.57□□□□□ -0.24
PER3P56645 FTLP10-202ENST00000505798 471 ntBASIC13.57□□□□□ -0.24
PER3P56645 AC022616.1-201ENST00000518688 554 ntBASIC13.57□□□□□ -0.24
PER3P56645 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 RN7SL725P-201ENST00000606439 259 ntBASIC13.57□□□□□ -0.24
PER3P56645 AL136295.7-201ENST00000619226 1200 ntBASIC13.57□□□□□ -0.24
PER3P56645 PRSS30P-206ENST00000641773 873 ntBASIC13.57□□□□□ -0.24
PER3P56645 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms