Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.16□□□□□ -0.14
AP1S2P56377 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AP1S2P56377 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AP1S2P56377 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.16□□□□□ -0.14
AP1S2P56377 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.16□□□□□ -0.14
AP1S2P56377 IGHV3-71-201ENST00000523324 359 ntBASIC14.16□□□□□ -0.14
AP1S2P56377 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.16□□□□□ -0.14
AP1S2P56377 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.16□□□□□ -0.14
AP1S2P56377 AC010328.2-201ENST00000597698 1111 ntBASIC14.16□□□□□ -0.14
AP1S2P56377 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.16□□□□□ -0.14
AP1S2P56377 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
AP1S2P56377 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
AP1S2P56377 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
AP1S2P56377 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
AP1S2P56377 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
AP1S2P56377 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 BEND3P1-201ENST00000421591 1944 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 MST1P2-201ENST00000457982 2291 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 AC011474.4-201ENST00000623523 2076 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AP1S2P56377 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 USP17L6P-201ENST00000382470 1197 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.15□□□□□ -0.14
AP1S2P56377 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.15□□□□□ -0.14
AP1S2P56377 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.15□□□□□ -0.14
AP1S2P56377 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 MIR4783-201ENST00000580343 82 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.15□□□□□ -0.14
AP1S2P56377 Z98259.2-201ENST00000641583 609 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.15□□□□□ -0.14
AP1S2P56377 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 AL359183.1-201ENST00000623796 2132 ntBASIC14.15□□□□□ -0.14
AP1S2P56377 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
AP1S2P56377 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP1S2P56377 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
AP1S2P56377 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.15□□□□□ -0.15
AP1S2P56377 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP1S2P56377 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.14□□□□□ -0.15
AP1S2P56377 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S2P56377 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S2P56377 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.14□□□□□ -0.15
AP1S2P56377 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP1S2P56377 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP1S2P56377 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms