Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 AC021305.1-201ENST00000520656 1514 ntBASIC15.91■□□□□ 0.14
CPT1AP50416 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CPT1AP50416 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.91■□□□□ 0.14
CPT1AP50416 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 PSMD4P1-201ENST00000433951 1109 ntBASIC15.91■□□□□ 0.14
CPT1AP50416 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.91■□□□□ 0.14
CPT1AP50416 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 RN7SL564P-201ENST00000496309 250 ntBASIC15.91■□□□□ 0.14
CPT1AP50416 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.91■□□□□ 0.14
CPT1AP50416 AC226150.1-201ENST00000544259 466 ntBASIC15.91■□□□□ 0.14
CPT1AP50416 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.91■□□□□ 0.14
CPT1AP50416 AC005357.2-202ENST00000590507 1060 ntBASIC15.91■□□□□ 0.14
CPT1AP50416 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPT1AP50416 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CPT1AP50416 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPT1AP50416 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 PKD1P5-201ENST00000532415 10291 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
CPT1AP50416 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 MIR1227-201ENST00000408484 88 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 GRPEL2P1-201ENST00000453145 339 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.9■□□□□ 0.14
CPT1AP50416 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 AC024293.1-201ENST00000467930 498 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 AC095040.1-201ENST00000513286 675 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 AC005740.1-201ENST00000515639 522 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.9■□□□□ 0.14
CPT1AP50416 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.9■□□□□ 0.14
CPT1AP50416 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.9■□□□□ 0.14
CPT1AP50416 AP005264.5-201ENST00000590066 467 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.9■□□□□ 0.14
CPT1AP50416 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CPT1AP50416 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CPT1AP50416 AL451007.2-201ENST00000632004 563 ntBASIC15.9■□□□□ 0.14
CPT1AP50416 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPT1AP50416 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.9■□□□□ 0.14
CPT1AP50416 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms