Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.16■□□□□ 0.18
VEGFBP49765 MIR4309-201ENST00000582498 83 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC16.16■□□□□ 0.18
VEGFBP49765 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
VEGFBP49765 BX510359.7-201ENST00000619819 630 ntBASIC16.16■□□□□ 0.18
VEGFBP49765 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.16■□□□□ 0.18
VEGFBP49765 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VEGFBP49765 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.15■□□□□ 0.18
VEGFBP49765 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VEGFBP49765 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 AC080080.1-201ENST00000625121 2420 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 HLA-DQB3-203ENST00000425319 356 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 IQCF4-203ENST00000428561 420 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 MROH4P-201ENST00000431302 1578 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 RN7SL677P-201ENST00000466970 319 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 RN7SL340P-201ENST00000470792 296 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 AC103724.2-201ENST00000520355 476 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
VEGFBP49765 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.15■□□□□ 0.18
VEGFBP49765 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC16.15■□□□□ 0.18
VEGFBP49765 AL031768.1-201ENST00000606542 701 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 AC010335.3-201ENST00000623767 531 ntBASIC16.15■□□□□ 0.18
VEGFBP49765 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC16.15■□□□□ 0.18
VEGFBP49765 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
VEGFBP49765 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VEGFBP49765 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC16.14■□□□□ 0.17
VEGFBP49765 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 TUBB8P9-201ENST00000422534 1276 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 TUBB8P10-201ENST00000430210 1279 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.14■□□□□ 0.17
VEGFBP49765 AC104115.1-201ENST00000484005 623 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.14■□□□□ 0.17
VEGFBP49765 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 AC133555.4-201ENST00000569081 152 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.14■□□□□ 0.17
VEGFBP49765 TUBA3GP-201ENST00000410028 1325 ntBASIC16.14■□□□□ 0.17
VEGFBP49765 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VEGFBP49765 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
VEGFBP49765 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VEGFBP49765 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms