Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC139713.2-207ENST00000641556 1292 ntBASIC17.63■□□□□ 0.41
TM4SF1P30408 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF1P30408 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF1P30408 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF1P30408 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF1P30408 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF1P30408 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TM4SF1P30408 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF1P30408 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.62■□□□□ 0.41
TM4SF1P30408 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 GOLGA2P8-201ENST00000505201 779 ntBASIC17.62■□□□□ 0.41
TM4SF1P30408 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.62■□□□□ 0.41
TM4SF1P30408 TYMSP2-201ENST00000589501 424 ntBASIC17.62■□□□□ 0.41
TM4SF1P30408 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC17.62■□□□□ 0.41
TM4SF1P30408 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.62■□□□□ 0.41
TM4SF1P30408 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF1P30408 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF1P30408 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF1P30408 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM4SF1P30408 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM4SF1P30408 AC023157.3-201ENST00000619086 2088 ntBASIC17.61■□□□□ 0.41
TM4SF1P30408 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.61■□□□□ 0.41
TM4SF1P30408 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 KRT18P15-201ENST00000458108 1291 ntBASIC17.61■□□□□ 0.41
TM4SF1P30408 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF1P30408 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF1P30408 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF1P30408 PTPN20CP-201ENST00000614090 920 ntBASIC17.61■□□□□ 0.41
TM4SF1P30408 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.61■□□□□ 0.41
TM4SF1P30408 AC026336.4-201ENST00000624565 1050 ntBASIC17.61■□□□□ 0.41
TM4SF1P30408 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TM4SF1P30408 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF1P30408 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TM4SF1P30408 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.61■□□□□ 0.41
TM4SF1P30408 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM4SF1P30408 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF1P30408 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms