Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 AC005840.4-201ENST00000541242 2494 ntBASIC13.41□□□□□ -0.26
ABCD3P28288 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AC020907.1-201ENST00000616460 1350 ntBASIC13.41□□□□□ -0.26
ABCD3P28288 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 SBF1P1-201ENST00000444527 5631 ntBASIC13.41□□□□□ -0.26
ABCD3P28288 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 AC064801.2-201ENST00000625052 1303 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 AC012617.1-204ENST00000586340 2305 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
ABCD3P28288 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.4□□□□□ -0.26
ABCD3P28288 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 MIR1247-201ENST00000408206 136 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 GPAA1P2-201ENST00000417923 928 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 ST13P19-201ENST00000442505 1124 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 KRT8P13-201ENST00000463294 1010 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 ZNF767P-206ENST00000513792 565 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 SNORD3B-2-202ENST00000571722 791 ntBASIC13.4□□□□□ -0.26
ABCD3P28288 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.4□□□□□ -0.26
ABCD3P28288 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.4□□□□□ -0.26
ABCD3P28288 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.4□□□□□ -0.26
ABCD3P28288 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ABCD3P28288 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ABCD3P28288 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.4□□□□□ -0.26
ABCD3P28288 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ABCD3P28288 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
ABCD3P28288 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ABCD3P28288 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ABCD3P28288 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.39□□□□□ -0.27
ABCD3P28288 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.39□□□□□ -0.27
ABCD3P28288 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.39□□□□□ -0.27
ABCD3P28288 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms