Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.38□□□□□ -0.43
VAMP1P23763 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 KRT8P14-201ENST00000414254 1442 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.38□□□□□ -0.43
VAMP1P23763 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 BEND3P3-201ENST00000611030 2440 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.38□□□□□ -0.43
VAMP1P23763 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VAMP1P23763 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 SEPT7P2-202ENST00000398921 823 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 FAAHP1-202ENST00000446499 1238 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.38□□□□□ -0.43
VAMP1P23763 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.38□□□□□ -0.43
VAMP1P23763 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.38□□□□□ -0.43
VAMP1P23763 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.38□□□□□ -0.43
VAMP1P23763 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 AL035422.2-201ENST00000603059 565 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 LINC01115-203ENST00000606068 577 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.38□□□□□ -0.43
VAMP1P23763 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VAMP1P23763 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.38□□□□□ -0.43
VAMP1P23763 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 APOBEC3D-201ENST00000216099 2528 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
VAMP1P23763 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.37□□□□□ -0.43
VAMP1P23763 TOMM22P5-201ENST00000416399 439 ntBASIC12.37□□□□□ -0.43
VAMP1P23763 HLA-K-203ENST00000430151 1046 ntBASIC12.37□□□□□ -0.43
VAMP1P23763 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
VAMP1P23763 LDHBP3-201ENST00000514909 822 ntBASIC12.37□□□□□ -0.43
VAMP1P23763 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
VAMP1P23763 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.37□□□□□ -0.43
VAMP1P23763 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 AC026150.2-201ENST00000564693 1156 ntBASIC12.37□□□□□ -0.43
VAMP1P23763 RN7SL510P-201ENST00000581311 263 ntBASIC12.37□□□□□ -0.43
VAMP1P23763 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.37□□□□□ -0.43
VAMP1P23763 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.37□□□□□ -0.43
VAMP1P23763 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
VAMP1P23763 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
VAMP1P23763 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.37□□□□□ -0.43
VAMP1P23763 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms